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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931663.1_cds_XP_016478408.1_70051
CDS Infomation

[gene=LOC107799774] [db_xref=GeneID:107799774] [protein=uncharacterized protein LOC107799774] [frame=2] [exception=annotated by transcript or proteomic data] [protein_id=XP_016478408.1] [location=complement(join(38053..38328,53393..53559,53774..53933,54118..54176,54327..54398,54481..54586,54920..55057,60342..60407,65590..65697,67792..67862,67937..68025,68964..69292,70697..70889,70978..71101,71199..71307,77200..>77236))] [gbkey=CDS]
Sequence

AAAAACACCATTTCCCTTCTTGTGAAGACTCTTAATGAGGAAGTAGTCTCATTCCCACTC
TATGTTGAGGCGATACGATTTGCCTTTCATGAAGAAAGCATGATTCGAACTGCGGTACGT
GCGCTAACCCTGAATGTATATCATGTTGGCGATGAGGCGGTTAACAAGTTTGTTGCCAGT
GCTCCTCATGCTGATTATTTCTCAAATTTGGTCAAATTTTTTGGGGAGCAATGCATCAGC
TTGGACAAGTTGGTTGTTAATGCTTCAAAGTGTCTGGGTCCAGATACTAGTGGTTCTATA
ATTTCCTCTGTTGATGAGATTGAGGACAACCTATATTACTTTAGTGATGTTATTTCAGCA
GGGATTCCTGACATTGGGAGGCTCATAACAGACCTCATGTTGAAGGTGCTGATATTTCCA
TCAATACTTCCTTCATTACGGATGGAAGTAGTTAAAGACAGTGATACAGGAATTGGAACC
GCAACTTCTTTATATTTACTTTGTTGCATCTTACGCATTGTCAAGATAAAAGATTTGGCG
AATATTGTTGCTGTTGCTCTTCTTTGTGATATAGAAACATTCGTCCCAACGTCTGAAGCT
AAACTGAATGGTTTCATGGATAACCATGGTATGTCACATGAAAATCAAGATTCAGAAAAT
GGTGGCTTCAGATCGGATTCTGATGGTCAAACTTTACGGGTTTTAATTCCAAACATATCC
AGCTCTTTAAATGGTCACCCAGAAGATGATGTTCCGCAACCAGATCATGGGAGTTCACAT
TCTGCATTATGGGAGGCCTTACTTTCTTATATTACTACTGGTGATGATGTTCAAGTTTCG
GGTTCTTTAAGTGTGCTGGCTACACTATTGCAGACTAAAGAGCTGGAAGAATCAATGCTC
GATGCTCTTGGAATCCTTCCACAAAGAAAACAACAGAAGAAACTCTTGCTGCAAGCTTTG
GTCGGTGAAGGATCTGCTGAAGAGCAACTTTTTTCCTCAGAAAATATGGTAAAGGATGGA
ATATGTAGTGAAATGGATTGCTACCTCCAAAAGTTGAAGGAGCAGTATGGATTGTTATGC
GTGTGCAAGGAGGTTACAGTGAGCCCTCGCATACATAGACTTCAAGTACTGGACGCATTG
GTCAGTCTATTCTGCAGGTCAAATATCTCTGCAGAAACATTGTGGGATGGTGGTTGGCTT
TTGCGCCAGTTGCTTCCATACAGTGAGGCGGATTTTAGCGGTCATCATCTTAAATTATTG
AAGGATTCATTCCACAGTTGTACTAGCTGTATTCTTGACGAATCAAAAGGAACTTGGCCT
GATTTGCTAATTGTGGTACTTTGTGAAGAGTGGAGGAACTGCAAAAGAACAATTGAAGCT
TCTTCTCCTAGAAAGGATCCCAAATCCATGCTTTTGCCATCACACAAGTCCCTTTCTGAA
GAACCTGCTTCTGGGGAATCATCTTTTACTGCTGGTGAAAGGTTGTGCGAGATGGTTAAG
GTGTTTGTACTACTTCGTCAGCTTCATATATTTTCAGTAGGAAAAGTGTTGCCCGATCAA
CCTCCTATACATCCTACAGTTGATATCATGGAATCATTCCGAGCAAAAAGGGCTGGCGTT
GACAGTTTGGGTCCAAAACCAAGTGTTGAATTAAGTCTTGTTGATGCAGTTCCTTGTAGA
ATTGCATTTGAGAGGGGCAAAGAACGTCATTTCCACTTTTTAGCCATCTCTGTAGGATCT
TCCGGATGGATTATCCTTGCAGATGAATTACCTTTGAGGCCAAGCTATGGTGTGGTTCGT
GTTGTTGCTCCTCTGGGAGGTTGCAACCCCCGAATTGACGAGAAGCACTTGAGATGGTTA
CACCTTCGAATACGTCCATCATCTTTCCCTTGCATAGATGTAGCAAAGCATGTGGCCCAT
GCGAGAGTTAAGTCAAAAGCTTTGGTCGATGGGAGGTGGACTCTGGCTTTTCGAGATGAG
GAATCTTGCAAAGCTGCTTTTTCTATGATTTATGAAGAGTTAAAGTTACTGAGCAATGAG
GTTGAGAGAAGAATAAAACCTATGCTTGACATTGAAAGAACTAATAATACTAAAACGGCA
TAG

Peptide Sequence

PEP ID

XP_016478408.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107799774 [Nicotiana tabacum]
Sequence

MWFSFWRSRDRFSLDEFRFLTDQLMKVQVVNEVNKDFVIEALRSIAELITYGDQHDVAYF
EFFMEKQVMGELVRILRISRTVIVSLQLLQTMSIVIQNLKNEHSIYYMFSNEHINHLITY
SFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTLNEEVVSFPLYVEAIRFAFHEESMI
RTAVRALTLNVYHVGDEAVNKFVASAPHADYFSNLVKFFGEQCISLDKLVVNASKCLGPD
TSGSIISSVDEIEDNLYYFSDVISAGIPDIGRLITDLMLKVLIFPSILPSLRMEVVKDSD
TGIGTATSLYLLCCILRIVKIKDLANIVAVALLCDIETFVPTSEAKLNGFMDNHGMSHEN
QDSENGGFRSDSDGQTLRVLIPNISSSLNGHPEDDVPQPDHGSSHSALWEALLSYITTGD
DVQVSGSLSVLATLLQTKELEESMLDALGILPQRKQQKKLLLQALVGEGSAEEQLFSSEN
MVKDGICSEMDCYLQKLKEQYGLLCVCKEVTVSPRIHRLQVLDALVSLFCRSNISAETLW
DGGWLLRQLLPYSEADFSGHHLKLLKDSFHSCTSCILDESKGTWPDLLIVVLCEEWRNCK
RTIEASSPRKDPKSMLLPSHKSLSEEPASGESSFTAGERLCEMVKVFVLLRQLHIFSVGK
VLPDQPPIHPTVDIMESFRAKRAGVDSLGPKPSVELSLVDAVPCRIAFERGKERHFHFLA
ISVGSSGWIILADELPLRPSYGVVRVVAPLGGCNPRIDEKHLRWLHLRIRPSSFPCIDVA
KHVAHARVKSKALVDGRWTLAFRDEESCKAAFSMIYEELKLLSNEVERRIKPMLDIERTN
NTKTA

Transcript Sequence

Gene sequence data has not been registered.